UtilityΒΆ

Definitions of ToeholdTools utility functions and objects.

Module-level attributes:

ASSUMED_STRAND_CONC

A molarity of 100nM.

Functions:

autoconfig

Quick configuration of ToeholdTests, assuming every RNA has the concentration of thtools.utils.ASSUMED_STRAND_CONC.

find_rbs

Get the slice the RBS occupies in a toehold switch sequence.

Classes:

ModelNu3

Class to emulate the behaviour of NUPACK v3.